MCP -- Table of Contents (October, 2009); 8 [10])

Research

Proteomics Characterization of Cell Membrane Blebs in Human Retinal Pigment Epithelium Cells

Oscar Alcazar, Adam M. Hawkridge, Timothy S. Collier, Scott W. Cousins, Sanjoy K. Bhattacharya, David C. Muddiman, and Maria E. Marin-Castano
Mol Cell Proteomics 2009: 2201–2211 First Published on June 29, 2009 doi:10.1074/mcp.M900203-MCP200
[Abstract] [Full Text] [PDF] [Supplemental Data]

Nuclear Receptor-Coregulator Interaction Profiling Identifies TRIP3 as a Novel Peroxisome Proliferator-activated Receptor ${gamma}$ Cofactor

Arjen Koppen, Rene Houtman, Dirk Pijnenburg, Ellen H. Jeninga, Rob Ruijtenbeek, and Eric Kalkhoven
Mol Cell Proteomics 2009: 2212–2226 First Published on July 10, 2009 doi:10.1074/mcp.M900209-MCP200
[Abstract] [Full Text] [PDF] [Supplemental Data]

Normalization and Statistical Analysis of Quantitative Proteomics Data Generated by Metabolic Labeling

Lily Ting, Mark J. Cowley, Seah Lay Hoon, Michael Guilhaus, Mark J. Raftery, and Ricardo Cavicchioli
Mol Cell Proteomics 2009: 2227–2242 First Published on July 14, 2009 doi:10.1074/mcp.M800462-MCP200
[Abstract] [Full Text] [PDF] [Supplemental Data]

Proteomics Analysis of Nucleolar SUMO-1 Target Proteins upon Proteasome Inhibition

Vittoria Matafora, Alfonsina D'Amato, Silvia Mori, Francesco Blasi, and Angela Bachi
Mol Cell Proteomics 2009: 2243–2255 First Published on July 12, 2009 doi:10.1074/mcp.M900079-MCP200
[Abstract] [Full Text] [PDF] [Supplemental Data]

Identification of Heparin-binding Sites in Proteins by Selective Labeling

Alessandro Ori, Paul Free, José Courty, Mark C. Wilkinson, and David G. Fernig
Mol Cell Proteomics 2009: 2256–2265 First Published on June 30, 2009 doi:10.1074/mcp.M900031-MCP200
[Abstract] [Full Text] [PDF] [Supplemental Data]

High Throughput Characterization of Combinatorial Histone Codes

Nicolas L. Young, Peter A. DiMaggio, Mariana D. Plazas-Mayorca, Richard C. Baliban, Christodoulos A. Floudas, and Benjamin A. Garcia
Mol Cell Proteomics 2009: 2266–2284 First Published on August 4, 2009 doi:10.1074/mcp.M900238-MCP200
[Abstract] [Full Text] [PDF] [Supplemental Data] F1000 Biology *Must Read* - FREE!

Development and Evaluation of Normalization Methods for Label-free Relative Quantification of Endogenous Peptides

Kim Kultima, Anna Nilsson, Birger Scholz, Uwe L. Rossbach, Maria Fälth, and Per E. Andrén
Mol Cell Proteomics 2009: 2285–2295 First Published on July 12, 2009 doi:10.1074/mcp.M800514-MCP200
[Abstract] [Full Text] [PDF] [Supplemental Data]

Identification and Validation of Urinary Biomarkers for Differential Diagnosis and Evaluation of Therapeutic Intervention in Anti-neutrophil Cytoplasmic Antibody-associated Vasculitis

Marion Haubitz, David M. Good, Alexander Woywodt, Hermann Haller, Harald Rupprecht, Dan Theodorescu, Mohammed Dakna, Joshua J. Coon, and Harald Mischak
Mol Cell Proteomics 2009: 2296–2307 First Published on June 28, 2009 doi:10.1074/mcp.M800529-MCP200
[Abstract] [Full Text] [PDF] [Supplemental Data]

A Mediator of Rho-dependent Invasion Moonlights as a Methionine Salvage Enzyme

Yukihito Kabuyama, Elizabeth S. Litman, Paul D. Templeton, Sandra I. Metzner, Eric S. Witze, Gretchen M. Argast, Stephen J. Langer, Kirsi Polvinen, Yiqun Shellman, Daniel Chan, John B. Shabb, James E. Fitzpatrick, Katheryn A. Resing, Marcelo C. Sousa, and Natalie G. Ahn
Mol Cell Proteomics 2009: 2308–2320 First Published on July 20, 2009 doi:10.1074/mcp.M900178-MCP200
[Abstract] [Full Text] [PDF] [Supplemental Data] AUTHOR'S CHOICE

Proteomics Analysis of Lactobacillus casei Zhang, a New Probiotic Bacterium Isolated from Traditional Home-made Koumiss in Inner Mongolia of China

Rina Wu, Weiwei Wang, Dongliang Yu, Wenyi Zhang, Yan Li, Zhihong Sun, Junrui Wu, He Meng, and Heping Zhang
Mol Cell Proteomics 2009: 2321–2338 First Published on June 8, 2009 doi:10.1074/mcp.M800483-MCP200
[Abstract] [Full Text] [PDF] [Supplemental Data][Supplemental Data]

Quantification of Cardiovascular Biomarkers in Patient Plasma by Targeted Mass Spectrometry and Stable Isotope Dilution

Hasmik Keshishian, Terri Addona, Michael Burgess, D. R. Mani, Xu Shi, Eric Kuhn, Marc S. Sabatine, Robert E. Gerszten, and Steven A. Carr
Mol Cell Proteomics 2009: 2339–2349 First Published on July 13, 2009 doi:10.1074/mcp.M900140-MCP200
[Abstract] [Full Text] [PDF] [Supplemental Data]

An Integrated Approach of Differential Mass Spectrometry and Gene Ontology Analysis Identified Novel Proteins Regulating Neuronal Differentiation and Survival

Daiki Kobayashi, Jiro Kumagai, Takashi Morikawa, Masayo Wilson-Morifuji, Anthony Wilson, Atsushi Irie, and Norie Araki
Mol Cell Proteomics 2009: 2350–2367 First Published on June 13, 2009 doi:10.1074/mcp.M900179-MCP200
[Abstract] [Full Text] [PDF] [Supplemental Data]

In Planta Proteomics and Proteogenomics of the Biotrophic Barley Fungal Pathogen Blumeria graminis f. sp. hordei

Laurence V. Bindschedler, Timothy A. Burgis, Davinia J. S. Mills, Jenny T. C. Ho, Rainer Cramer, and Pietro D. Spanu
Mol Cell Proteomics 2009: 2368–2381 First Published on July 14, 2009 doi:10.1074/mcp.M900188-MCP200
[Abstract] [Full Text] [PDF] [Supplemental Data]

Identification of Tumor-associated Autoantigens for the Diagnosis of Colorectal Cancer in Serum Using High Density Protein Microarrays

Ingrid Babel, Rodrigo Barderas, Ramón Díaz-Uriarte, Jorge Luis Martínez-Torrecuadrada, Marta Sánchez-Carbayo, and J. Ignacio Casal
Mol Cell Proteomics 2009: 2382–2395 First Published on July 28, 2009 doi:10.1074/mcp.M800596-MCP200
[Abstract] [Full Text] [PDF] [Supplemental Data]

Lack of A-factor Production Induces the Expression of Nutrient Scavenging and Stress-related Proteins in Streptomyces griseus

Zsuzsanna Birkó, Magdalena Swiatek, Emília Szájli, Katalin F. Medzihradszky, Erik Vijgenboom, András Penyige, Judit Keseru, Gilles P. van Wezel, and Sándor Biró
Mol Cell Proteomics 2009: 2396–2403 First Published on July 22, 2009 doi:10.1074/mcp.M900194-MCP200
[Abstract] [Full Text] [PDF] [Supplemental Data][Supplemental Data]